STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
polADNA polymerase I. (889 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase III beta subunit.
 
 0.996
recA
Protein synonym:recombinase A.
 
 0.990
BAN03006.1
Putative ATP-dependent DNA helicase.
  
 0.989
sbcD
Putative nuclease SbcCD subunit D.
  
 0.987
BAN01284.1
Putative DNA polymerase.
 
 
0.967
BAN02733.1
Putative ATP-dependent helicase.
  
 0.939
recQ
ATP-dependent DNA helicase RecQ.
  
 0.936
BAN01258.1
Hypothetical protein.
  
 0.931
topA
DNA topoisomerase I.
 
 0.918
secA
Preprotein translocase SecA subunit.
 
  
 0.907
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.