STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN02494.1BioY family protein. (186 aa)    
Predicted Functional Partners:
BAN03189.1
Protein synonym:biotin--[acetyl-CoA-carboxylase] ligase.
 
   
 0.717
accA-2
acyl-CoA carboxylase alpha chain; Protein synonym:biotin carboxylase/biotin carboxyl carrier protein.
 
     0.626
accA
acyl-CoA carboxylase alpha chain; Protein synonym:biotin carboxylase/biotin carboxyl carrier protein.
 
     0.614
BAN02495.1
Putative flavin-containing monooxygenase.
  
  
 0.577
pfaBC
Putative omega-3 polyunsaturated fatty acid synthase PfaBC.
     
 0.538
fabF
Protein synonym:beta-ketoacyl-ACP synthase II.
 
     0.534
fabZ
Beta-hydroxyacyl-[acyl-carrier-protein] dehydratase.
 
   
 0.511
BAN02498.1
Putative metal ABC transporter metal-binding protein.
 
 
   0.480
BAN02496.1
Putative CoA-transferase.
       0.465
BAN02497.1
Putative Fur family transcriptional regulator.
       0.436
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.