STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN02618.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
BAN02620.1
Hypothetical protein.
 
     0.953
BAN02617.1
Putative phage tail sheath protein.
 
     0.938
BAN02626.1
Hypothetical protein.
 
     0.903
BAN02624.1
Hypothetical protein.
 
     0.895
BAN02625.1
Hypothetical protein.
 
     0.895
BAN02627.1
Hypothetical protein.
 
     0.887
BAN02628.1
Hypothetical protein.
 
     0.885
BAN02615.1
Putative ATPase.
 
     0.869
BAN02619.1
Hypothetical protein.
 
    
0.829
BAN02622.1
Hypothetical protein.
 
    
0.828
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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