STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN02630.1Hypothetical protein. (2600 aa)    
Predicted Functional Partners:
BAN02631.1
Hypothetical protein.
 
    
0.873
BAN02632.1
Hypothetical protein.
      
0.819
BAN02624.1
Hypothetical protein.
 
   
 0.789
BAN02633.1
Hypothetical protein.
       0.785
BAN02628.1
Hypothetical protein.
 
     0.774
BAN02634.1
Hypothetical protein.
 
     0.753
BAN02627.1
Hypothetical protein.
  
     0.751
BAN02617.1
Putative phage tail sheath protein.
 
     0.741
BAN02620.1
Hypothetical protein.
 
     0.739
BAN02625.1
Hypothetical protein.
 
     0.727
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.