STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN02931.1Hypothetical protein. (116 aa)    
Predicted Functional Partners:
BAN02930.1
Hypothetical protein.
       0.680
BAN02932.1
Peptidase S16 family protein.
       0.630
BAN02928.1
Hypothetical protein.
       0.626
BAN02929.1
Hypothetical protein.
       0.621
dac
Putative D-alanyl-D-alanine carboxypeptidase; Protein synonym:DD-peptidase.
       0.519
dac-2
Putative D-alanyl-D-alanine carboxypeptidase; Protein synonym:DD-peptidase.
       0.519
BAN02935.1
Putative acyl-CoA synthetase; Protein synonym:fatty acid--CoA ligase.
       0.504
trmI
Putative tRNA (adenine-N(1)-)-methyltransferase.
       0.483
BAN02927.1
Hypothetical protein.
       0.451
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.