STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
accA-2acyl-CoA carboxylase alpha chain; Protein synonym:biotin carboxylase/biotin carboxyl carrier protein. (591 aa)    
Predicted Functional Partners:
BAN02535.1
Putative acyl-CoA carboxylase beta chain.
 
 0.999
pccB
Putative propionyl-CoA carboxylase beta chain; Protein synonym:carboxyltransferase.
 
 0.989
accD
acyl-CoA carboxylase beta chain; Protein synonym:carboxyltransferase.
 
 0.989
pccB-2
Putative propionyl-CoA carboxylase beta chain; Protein synonym:carboxyltransferase.
 
 0.989
fabD
Malonyl CoA-acyl carrier protein transacylase.
 
 
 0.980
BAN03189.1
Protein synonym:biotin--[acetyl-CoA-carboxylase] ligase.
 
  
 0.979
fabH
Protein synonym:beta-ketoacyl-ACP synthase III.
 
 
 0.974
pfaBC
Putative omega-3 polyunsaturated fatty acid synthase PfaBC.
  
  
 0.956
BAN03003.1
Putative 2-oxoglutarate--ferredoxin oxidoreductase alpha subunit.
   
 0.946
leuA
Protein synonym:alpha-isopropylmalate synthase.
  
 
 0.944
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.