Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAN00641.1 | BAN01205.1 | YM304_03270 | YM304_08910 | Putative ATP-dependent RNA helicase. | Hypothetical protein. | 0.921 |
| BAN00641.1 | BAN01219.1 | YM304_03270 | YM304_09050 | Putative ATP-dependent RNA helicase. | Putative ribonuclease. | 0.425 |
| BAN00641.1 | BAN03248.1 | YM304_03270 | YM304_29340 | Putative ATP-dependent RNA helicase. | Putative hydrolase. | 0.679 |
| BAN00641.1 | rph | YM304_03270 | YM304_27700 | Putative ATP-dependent RNA helicase. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.690 |
| BAN01205.1 | BAN00641.1 | YM304_08910 | YM304_03270 | Hypothetical protein. | Putative ATP-dependent RNA helicase. | 0.921 |
| BAN01205.1 | BAN01591.1 | YM304_08910 | YM304_12770 | Hypothetical protein. | Putative ATP-dependent RNA helicase. | 0.921 |
| BAN01205.1 | BAN03248.1 | YM304_08910 | YM304_29340 | Hypothetical protein. | Putative hydrolase. | 0.954 |
| BAN01205.1 | deaD | YM304_08910 | YM304_07160 | Hypothetical protein. | ATP-dependent RNA helicase DeaD; Protein synonym:cold-shock DEAD box protein A. | 0.921 |
| BAN01205.1 | katE | YM304_08910 | YM304_39750 | Hypothetical protein. | Catalase. | 0.407 |
| BAN01219.1 | BAN00641.1 | YM304_09050 | YM304_03270 | Putative ribonuclease. | Putative ATP-dependent RNA helicase. | 0.425 |
| BAN01219.1 | BAN01591.1 | YM304_09050 | YM304_12770 | Putative ribonuclease. | Putative ATP-dependent RNA helicase. | 0.425 |
| BAN01219.1 | BAN03248.1 | YM304_09050 | YM304_29340 | Putative ribonuclease. | Putative hydrolase. | 0.724 |
| BAN01219.1 | deaD | YM304_09050 | YM304_07160 | Putative ribonuclease. | ATP-dependent RNA helicase DeaD; Protein synonym:cold-shock DEAD box protein A. | 0.425 |
| BAN01219.1 | rph | YM304_09050 | YM304_27700 | Putative ribonuclease. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.980 |
| BAN01591.1 | BAN01205.1 | YM304_12770 | YM304_08910 | Putative ATP-dependent RNA helicase. | Hypothetical protein. | 0.921 |
| BAN01591.1 | BAN01219.1 | YM304_12770 | YM304_09050 | Putative ATP-dependent RNA helicase. | Putative ribonuclease. | 0.425 |
| BAN01591.1 | BAN03248.1 | YM304_12770 | YM304_29340 | Putative ATP-dependent RNA helicase. | Putative hydrolase. | 0.679 |
| BAN01591.1 | rph | YM304_12770 | YM304_27700 | Putative ATP-dependent RNA helicase. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.690 |
| BAN02755.1 | BAN03248.1 | YM304_24410 | YM304_29340 | Putative L-lactate dehydrogenase. | Putative hydrolase. | 0.460 |
| BAN02755.1 | BAN03330.1 | YM304_24410 | YM304_30160 | Putative L-lactate dehydrogenase. | Putative phosphonopyruvate decarboxylase. | 0.453 |
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