STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN03273.1Hypothetical protein. (528 aa)    
Predicted Functional Partners:
BAN03274.1
Putative Xre family DNA-binding protein.
 
  
 0.858
moeB
Putative molybdopterin synthase sulfurylase MoeB; Protein synonym:molybdenum cofactor biosynthesis protein.
  
  
 0.779
ahpC
Alkyl hydroperoxide reductase subunit C; Protein synonym:peroxiredoxin.
  
 
 0.755
BAN03741.1
Peroxiredoxin.
  
 
 0.755
katE
Catalase.
  
 
 0.749
trxA
Thioredoxin.
  
 
 0.732
BAN02413.1
Putative thioredoxin.
  
 
 0.732
trxA-2
Thioredoxin.
  
 
 0.732
BAN04319.1
Putative NADH-dependent oxidoreductase.
  
 
 0.698
cysNC
Sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase; Bifunctional protein.
     
 0.683
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.