STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN03628.1Putative MazG family protein. (495 aa)    
Predicted Functional Partners:
BAN03627.1
Hypothetical protein.
       0.773
mfd
Transcription-repair-coupling factor; Protein synonym:ATP-dependent helicase Mfd.
     
 0.713
pth
Protein synonym:aminoacyl-tRNA hydrolase.
     
 0.569
era
GTP-binding protein Era.
   
 
 0.550
BAN02909.1
Putative thymidylate synthase.
    
 0.547
nfuA
Putative Fe/S biogenesis protein NfuA.
 
     0.527
pheT
Protein synonym:phenylalanine--tRNA ligase beta chain.
 
   
 0.504
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
     
  0.499
BAN03980.1
RNA-binding protein.
  
    0.474
rplY
50S ribosomal protein L25.
       0.470
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.