STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN03676.1Hypothetical protein. (120 aa)    
Predicted Functional Partners:
BAN03675.1
Putative oxidoreductase.
       0.757
BAN03201.1
Hypothetical protein.
      
 0.572
BAN03674.1
Putative 5-formyltetrahydrofolate cyclo-ligase; Protein synonym:5,10-methenyl-tetrahydrofolate synthetase.
       0.545
BAN01911.1
Hypothetical protein.
  
     0.531
BAN00423.1
Hypothetical protein.
  
     0.486
BAN03246.1
Hypothetical protein.
  
     0.472
BAN02336.1
Hypothetical protein.
  
     0.461
BAN00552.1
Hypothetical protein.
  
     0.432
BAN03673.1
Putative L-threo-3-hydroxyaspartate dehydratase; Protein synonym:threo-3-hydroxyaspartate ammonia-lyase.
       0.430
mca
Putative mycothiol conjugate amidase.
  
     0.418
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.