STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN03797.1Putative ABC transporter permease protein. (463 aa)    
Predicted Functional Partners:
BAN03796.1
Putative ABC transporter permease protein.
 0.995
BAN03798.1
Putative ABC transporter substrate-binding protein.
 
 0.991
BAN04003.1
Putative ABC transporter permease protein.
 0.980
BAN04002.1
Putative ABC transporter substrate-binding protein.
 
 0.979
BAN04004.1
Putative ABC transporter permease protein.
  
  
 
0.924
BAN01071.1
Putative sugar ABC transporter permease protein.
 
 
 0.907
BAN03481.1
Putative ABC transporter permease protein.
 
 0.907
BAN04420.1
Putative ABC transporter permease protein.
 
 
 0.907
BAN03564.1
Sugar ABC transporter permease protein.
 
 0.903
BAN04425.1
ABC transporter ATP-binding protein.
 
 
 0.899
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.