STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN04073.1Putative anti-sigma factor antagonist. (106 aa)    
Predicted Functional Partners:
BAN04072.1
Putative sigma factor regulation protein.
  
 
 0.983
sigF
RNA polymerase sigma factor SigF.
 
 
 0.905
BAN04375.1
Putative serine/threonine protein phosphatase.
 
 
 0.807
BAN02995.1
Putative serine/threonine protein phosphatase.
 
 
 0.780
BAN03448.1
Putative serine/threonine protein phosphatase.
 
 
 0.757
BAN01120.1
Putative serine/threonine protein phosphatase.
 
 
 0.751
fbiC
FO synthase; Protein synonym:7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase.
  
    0.743
BAN02135.1
Putative serine/threonine protein phosphatase.
 
 
 0.710
BAN04071.1
Hypothetical protein.
       0.693
BAN03552.1
Putative sigma factor regulation protein.
 
 
 0.692
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.