STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemBDelta-aminolevulinic acid dehydratase; Protein synonym:porphobilinogen synthase. (335 aa)    
Predicted Functional Partners:
hemL
Protein synonym:glutamate-1-semialdehyde aminotransferase.
 
 
 0.998
hemC
Porphobilinogen deaminase; Protein synonym:hydroxymethylbilane synthase; protein synonym:pre-uroporphyrinogen synthase.
 
 0.998
BAN04478.1
Putative beta-transaminase.
 
 
 0.990
hemD
Putative uroporphyrinogen III synthase.
 
 
 0.959
hemA
glutamyl-tRNA reductase.
 
  
 0.932
BAN03823.1
Uroporphyrinogen III methyltransferase.
 
  
 0.906
hemE
Uroporphyrinogen decarboxylase.
 
 
 0.828
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 0.743
BAN03820.1
Putative precorrin-2 dehydrogenase.
 
   
 0.708
hemY
Protoporphyrinogen oxidase.
 
  
 0.646
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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