STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN04164.1Putative WhiB family transcriptional regulator. (175 aa)    
Predicted Functional Partners:
rpoC
DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.874
BAN00968.1
Hypothetical protein.
  
     0.677
BAN02275.1
Hypothetical protein.
  
     0.665
BAN00606.1
Hypothetical protein.
  
     0.633
BAN03711.1
Hypothetical protein.
  
     0.633
BAN02210.1
Hypothetical protein.
  
     0.632
BAN00552.1
Hypothetical protein.
  
     0.605
BAN04103.1
Hypothetical protein.
  
     0.586
rpoB
DNA-directed RNA polymerase beta subunit; Protein synonym:transcriptase beta subunit; Belongs to the RNA polymerase beta chain family.
    
 
 0.584
BAN01528.1
Hypothetical protein.
  
     0.578
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.