STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN04308.1Putative GntR family transcriptional regulator. (237 aa)    
Predicted Functional Partners:
BAN04309.1
Hypothetical protein.
       0.773
BAN04310.1
Putative acid--CoA ligase.
       0.773
BAN04307.1
Putative ABC transporter ATP-binding protein.
  
    0.543
BAN02754.1
Putative GntR family transcriptional regulator.
  
     0.515
BAN04306.1
Putative ABC transporter permease protein.
  
    0.485
BAN00917.1
Putative Xre family DNA-binding protein.
  
  
 0.466
BAN01929.1
Putative Xre family DNA-binding protein.
  
  
 0.466
BAN04356.1
Putative GntR family transcriptional regulator.
  
     0.450
BAN00670.1
Hypothetical protein.
  
    0.401
BAN00862.1
Hypothetical protein.
  
    0.401
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.