STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN04338.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
BAN04339.1
Hypothetical protein.
 
     0.732
BAN03236.1
Arsenate reductase.
   
 
 0.484
BAN04340.1
Putative TetR family transcriptional regulator.
 
     0.484
BAN04595.1
Putative arsenate reductase.
   
 
 0.484
BAN04335.1
Putative ABC transporter permease protein.
       0.458
BAN04336.1
Putative ABC transporter permease protein.
       0.458
BAN04337.1
Putative ABC transporter ATP-binding protein.
       0.458
BAN00892.1
Putative oxidoreductase.
  
    0.414
BAN00709.1
Hypothetical protein.
  
  
 0.406
BAN03141.1
Putative hemoglobin-like protein.
  
  
 0.406
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.