STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN04351.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
BAN04352.1
Hypothetical protein.
 
     0.879
BAN04350.1
Hypothetical protein.
 
 
0.853
BAN04353.1
Hypothetical protein.
  
  
 0.546
BAN02709.1
Hypothetical protein.
   
   0.534
BAN04354.1
Hypothetical protein.
       0.494
BAN04301.1
Hypothetical protein.
 
 
 0.475
rpsQ
30S ribosomal protein S17.
   
   0.459
rplQ
50S ribosomal protein L17.
  
   0.437
arsC
Protein synonym:arsenate reductase; protein synonym:protein-tyrosine phosphatase.
  
 
 0.427
rplM
50S ribosomal protein L13.
   
   0.417
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.