STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN04540.1Hypothetical protein. (131 aa)    
Predicted Functional Partners:
BAN01743.1
Putative undecaprenyl-phosphate glycosylphosphotransferase.
  
  
 0.882
hyuA-2
Putative hydantoinase A; Protein synonym:hydantoin utilization protein A.
       0.782
BAN04541.1
Putative dioxygenase.
       0.779
hyuB-2
Putative hydantoinase B; Protein synonym:hydantoin utilization protein B.
       0.709
BAN04537.1
fatty-acid--CoA ligase; Protein synonym:acyl-CoA synthetase.
     
 0.707
BAN04536.1
Putative oxidoreductase.
       0.697
pgl/pgi
6-phosphogluconolactonase/glucose-6-phosphate isomerase.
     
 0.557
BAN04532.1
Putative ABC transporter permease protein.
       0.522
BAN04533.1
Putative ABC transporter permease protein.
       0.522
BAN04534.1
Putative ABC transporter ATP-binding protein.
       0.522
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.