STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAN04558.1Putative ABC transporter ATP-binding protein. (289 aa)    
Predicted Functional Partners:
ccmA
Cytochrome c biogenesis ATP-binding export protein CcmA; Protein synonym:heme exporter protein A.
 
    
0.927
BAN04463.1
Putative ABC transporter ATP-binding protein.
 
    
0.927
BAN00932.1
Branched-chain amino acid transporter ATP-binding protein.
     
0.890
BAN04556.1
Putative RNA polymerase ECF subfamily sigma factor.
 
     0.816
BAN04557.1
Hypothetical protein.
       0.773
BAN04425.1
ABC transporter ATP-binding protein.
 
     
0.704
BAN01267.1
Putative ABC transporter ATP-binding protein.
   
0.688
BAN04555.1
Hypothetical protein.
       0.678
BAN02776.1
Putative ABC transporter permease/ATP-binding protein.
 
 0.636
BAN02790.1
Putative ABC transporter ATP-binding protein.
     
0.614
Your Current Organism:
Ilumatobacter coccineus
NCBI taxonomy Id: 1313172
Other names: Acidimicrobidae bacterium YM16-304, I. coccineus YM16-304, Ilumatobacter coccineum YM16-304, Ilumatobacter coccineus YM16-304
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