STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF92966.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (288 aa)    
Predicted Functional Partners:
SMF92964.1
Permease of the drug/metabolite transporter (DMT) superfamily.
 
    0.820
SMF92968.1
Hypothetical protein.
       0.773
SMF90545.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.763
SMF92970.1
Uncharacterized membrane protein, YccA/Bax inhibitor family.
       0.559
SMF72693.1
Glutamate synthase (NADH) large subunit.
     
 0.419
SMF65434.1
Conserved hypothetical integral membrane protein.
 
     0.413
Your Current Organism:
Paenibacillus uliginis
NCBI taxonomy Id: 1313296
Other names: P. uliginis N3/975, Paenibacillus sp. N3/975, Paenibacillus uliginis DSM 21861, Paenibacillus uliginis LMG 24790, Paenibacillus uliginis N3/975
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.