STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426825_00162Unannotated protein. (435 aa)    
Predicted Functional Partners:
GCA_000426825_00813
Unannotated protein.
  
 0.983
GCA_000426825_00745
Unannotated protein.
   
    0.925
GCA_000426825_01055
Unannotated protein.
 
  
 0.924
GCA_000426825_02134
Unannotated protein.
 
  
 0.854
GCA_000426825_00163
Unannotated protein.
 
   
0.775
GCA_000426825_00133
Unannotated protein.
 
   
 0.702
GCA_000426825_01656
Unannotated protein.
 
  
 0.650
GCA_000426825_00161
Unannotated protein.
       0.615
GCA_000426825_00297
Unannotated protein.
 
  
 0.601
GCA_000426825_00375
Unannotated protein.
  
  
 0.585
Your Current Organism:
Thermonema rossianum
NCBI taxonomy Id: 1313301
Other names: T. rossianum DSM 10300, Thermonema rossianum DSM 10300
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.