STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426825_00726Unannotated protein. (677 aa)    
Predicted Functional Partners:
GCA_000426825_02310
Unannotated protein.
  
  0.833
GCA_000426825_02311
Unannotated protein.
  
  0.826
GCA_000426825_01448
Unannotated protein.
     
 0.811
GCA_000426825_01409
Unannotated protein.
  
  
 
0.757
GCA_000426825_01790
Unannotated protein.
  
  
 
0.756
GCA_000426825_00284
Unannotated protein.
  
  
 
0.754
GCA_000426825_01227
Unannotated protein.
  
 
  0.750
GCA_000426825_00037
Unannotated protein.
  
  
 
0.749
GCA_000426825_02237
Unannotated protein.
  
  
 
0.741
GCA_000426825_00127
Unannotated protein.
  
  
 
0.740
Your Current Organism:
Thermonema rossianum
NCBI taxonomy Id: 1313301
Other names: T. rossianum DSM 10300, Thermonema rossianum DSM 10300
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.