STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALK_0318Adenylate/guanylate cyclase with Chase sensor. (731 aa)    
Predicted Functional Partners:
CALK_0658
Putative cyclic nucleotide-binding protein.
 
 
 0.989
CALK_2278
Signal transduction histidine kinase.
   
 0.973
CALK_0645
Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name.
  
 0.966
CALK_1399
PAS/PAC sensor hybrid histidine kinase.
  
 0.966
CALK_0863
PAS/PAC sensor hybrid histidine kinase.
   
 0.965
CALK_2274
Pas/pac sensor signal transduction histidine kinase.
  
 0.963
CALK_0054
Two-component system sensor histidine kinase/response regulator hybrid.
 
 
 0.941
CALK_0334
Response regulator.
 0.936
CALK_2273
Multi-sensor hybrid histidine kinase.
 
 
 0.936
CALK_0644
Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name.
   
 0.928
Your Current Organism:
Chitinivibrio alkaliphilus
NCBI taxonomy Id: 1313304
Other names: C. alkaliphilus ACht1, Chitinivibrio alkaliphilus ACht1, candidate division TG3 bacterium ACht1, haloalkaliphilic bacterium ACht1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.