STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALK_0499Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. (233 aa)    
Predicted Functional Partners:
CALK_0496
Sulfate adenylyltransferase large subunit.
 0.999
CALK_0497
Sulfate adenylyltransferase, large subunit.
 
 0.986
cysD
Sulfate adenylyltransferase subunit 2.
   
  0.982
CALK_0493
Hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase; Belongs to the precorrin methyltransferase family.
 
  
 0.953
CALK_0495
Siroheme synthase.
 
  
 0.868
CALK_1811
Pyridine nucleotide-disulfide oxidoreductase family protein; Belongs to the sulfur carrier protein TusA family.
  
 
 0.844
CALK_0988
Thioredoxin-disulfide reductase.
   
 0.736
CALK_2322
Rubredoxin/flavodoxin/oxidoreductase.
    
 0.720
hemA
glutamyl-tRNA reductase (GluTR); Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
     
 0.659
CALK_1104
Glutamate synthase, large subunit.
  
 
 0.638
Your Current Organism:
Chitinivibrio alkaliphilus
NCBI taxonomy Id: 1313304
Other names: C. alkaliphilus ACht1, Chitinivibrio alkaliphilus ACht1, candidate division TG3 bacterium ACht1, haloalkaliphilic bacterium ACht1
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