STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALK_1284V-type ATPase, subunit D. (199 aa)    
Predicted Functional Partners:
CALK_1282
V-type ATPase, subunit K; Belongs to the V-ATPase proteolipid subunit family.
 
 0.999
CALK_1283
V-type ATPase, subunit I; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
CALK_1285
V-type ATP synthase subunit B.
 
 0.999
atpA
V-type ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.999
CALK_1287
V-type ATPase, subunit C.
 
 0.999
CALK_1288
V-type ATPase, subunit E; Belongs to the ATPase B chain family.
 
 0.999
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
  
 
  0.807
CALK_1568
Putative lipoprotein.
    
  0.794
CALK_0804
3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III.
    
 0.769
CALK_1408
Iron-sulfur binding hydrogenase.
  
  
  0.673
Your Current Organism:
Chitinivibrio alkaliphilus
NCBI taxonomy Id: 1313304
Other names: C. alkaliphilus ACht1, Chitinivibrio alkaliphilus ACht1, candidate division TG3 bacterium ACht1, haloalkaliphilic bacterium ACht1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.