STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALK_1311Hypothetical protein. (668 aa)    
Predicted Functional Partners:
CALK_1309
Hypothetical protein.
       0.773
CALK_1310
Hypothetical protein.
       0.773
CALK_1312
Hypothetical protein.
       0.648
CALK_1308
Hypothetical protein.
       0.634
CALK_0077
N-acetylneuraminic acid (Neu5Ac) synthase.
 
   
 0.616
CALK_2346
Pseudaminic acid synthase.
 
   
 0.605
CALK_0818
Metal dependent phosphohydrolase.
  
    0.589
CALK_1307
Flagellar protein FlaG protein.
       0.521
CALK_1306
Flagellar hook-associated protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
       0.495
CALK_1305
Hypothetical protein.
       0.464
Your Current Organism:
Chitinivibrio alkaliphilus
NCBI taxonomy Id: 1313304
Other names: C. alkaliphilus ACht1, Chitinivibrio alkaliphilus ACht1, candidate division TG3 bacterium ACht1, haloalkaliphilic bacterium ACht1
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