Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CALK_0113 | CALK_0644 | Anti-sigma-factor antagonist. | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | 0.912 |
| CALK_0113 | CALK_0645 | Anti-sigma-factor antagonist. | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | 0.923 |
| CALK_0113 | CALK_1242 | Anti-sigma-factor antagonist. | Anti-sigma-factor antagonist. | 0.896 |
| CALK_0113 | CALK_1399 | Anti-sigma-factor antagonist. | PAS/PAC sensor hybrid histidine kinase. | 0.923 |
| CALK_0113 | CALK_1407 | Anti-sigma-factor antagonist. | Signal transduction protein with CBS domain. | 0.910 |
| CALK_0113 | CALK_1739 | Anti-sigma-factor antagonist. | Signal transduction histidine kinase. | 0.887 |
| CALK_0113 | CALK_2277 | Anti-sigma-factor antagonist. | PAS-domains containing protein. | 0.908 |
| CALK_0644 | CALK_0113 | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | Anti-sigma-factor antagonist. | 0.912 |
| CALK_0644 | CALK_0645 | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | 0.999 |
| CALK_0644 | CALK_1242 | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | Anti-sigma-factor antagonist. | 0.997 |
| CALK_0644 | CALK_1399 | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | PAS/PAC sensor hybrid histidine kinase. | 0.999 |
| CALK_0644 | CALK_1407 | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | Signal transduction protein with CBS domain. | 0.882 |
| CALK_0644 | CALK_1707 | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | Anti-sigma-factor antagonist. | 0.912 |
| CALK_0644 | CALK_1739 | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | Signal transduction histidine kinase. | 0.996 |
| CALK_0644 | CALK_2277 | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | PAS-domains containing protein. | 0.999 |
| CALK_0644 | CALK_2299 | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | Anti-sigma-factor antagonist. | 0.912 |
| CALK_0645 | CALK_0113 | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | Anti-sigma-factor antagonist. | 0.923 |
| CALK_0645 | CALK_0644 | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | 0.999 |
| CALK_0645 | CALK_1242 | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | Anti-sigma-factor antagonist. | 0.997 |
| CALK_0645 | CALK_1399 | Multi-sensor hybrid histidine kinase; Overlaps another CDS with the same product name. | PAS/PAC sensor hybrid histidine kinase. | 0.998 |
page 1 of 5