STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000724545_01483Unannotated protein. (476 aa)    
Predicted Functional Partners:
GCA_000724545_01037
Unannotated protein.
  
    0.913
GCA_000724545_03080
Unannotated protein.
  
 0.875
GCA_000724545_03077
Unannotated protein.
  
 0.866
GCA_000724545_01859
Unannotated protein.
   
 0.809
GCA_000724545_01035
Unannotated protein.
   
 0.795
GCA_000724545_00662
Unannotated protein.
  
 
 0.753
GCA_000724545_01482
Unannotated protein.
 
  
  0.729
GCA_000724545_01286
Unannotated protein.
  
 
 0.691
GCA_000724545_04293
Unannotated protein.
 
 
  0.573
GCA_000724545_05536
Unannotated protein.
  
    0.540
Your Current Organism:
Aureispira sp. CCBQB1
NCBI taxonomy Id: 1313421
Other names: A. sp. CCB-QB1, Aureispira sp. CCB-QB1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.