STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000724545_04538Unannotated protein. (514 aa)    
Predicted Functional Partners:
GCA_000724545_04539
Unannotated protein.
 
 0.991
GCA_000724545_04542
Unannotated protein.
 
   
 0.801
GCA_000724545_04541
Unannotated protein.
 
  
 0.790
GCA_000724545_04540
Unannotated protein.
 
  
 
0.739
GCA_000724545_04543
Unannotated protein.
 
  
  0.673
GCA_000724545_03177
Unannotated protein.
 
 
 0.663
GCA_000724545_01806
Unannotated protein.
    
 0.569
GCA_000724545_01860
Unannotated protein.
    
 0.569
GCA_000724545_05227
Unannotated protein.
  
  
  0.562
GCA_000724545_04713
Unannotated protein.
 
     0.492
Your Current Organism:
Aureispira sp. CCBQB1
NCBI taxonomy Id: 1313421
Other names: A. sp. CCB-QB1, Aureispira sp. CCB-QB1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.