STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000724545_05314Unannotated protein. (92 aa)    
Predicted Functional Partners:
GCA_000724545_05315
Unannotated protein.
 
    0.820
GCA_000724545_01224
Unannotated protein.
  
 
 0.748
GCA_000724545_05401
Unannotated protein.
  
     0.489
Your Current Organism:
Aureispira sp. CCBQB1
NCBI taxonomy Id: 1313421
Other names: A. sp. CCB-QB1, Aureispira sp. CCB-QB1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.