STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINB1Serpin family B member 1. (378 aa)    
Predicted Functional Partners:
ENSMUNP00000002054
annotation not available
  
 0.682
ENSMUNP00000019745
annotation not available
  
 0.682
LOC101873974
Vitronectin.
   
 0.621
LOC101871590
Cathepsin L.
   
 0.592
HGFAC
HGF activator.
  
 0.582
PROC
Protein C, inactivator of coagulation factors Va and VIIIa.
  
 0.580
PLAT
Plasminogen activator, tissue type.
   
 0.550
HABP2
Hyaluronan binding protein 2.
  
 0.516
ENSMUNP00000003998
annotation not available
  
  0.511
F9
Coagulation factor IX.
  
  0.511
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.