STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF122Ring finger protein 122. (98 aa)    
Predicted Functional Partners:
LOC101874167
Ribosomal protein S27a.
    
 0.833
UBE2K
Ubiquitin conjugating enzyme E2 K.
    
 0.715
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.706
LOC101878836
Ubiquitin conjugating enzyme E2 N.
   
 0.689
SMAD6
SMAD family member 6.
   
 0.682
SMAD7
SMAD family member 7.
   
 0.682
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.656
OASL
2'-5'-oligoadenylate synthase-like protein 2.
   
 0.646
LOC101874908
Ubiquitin B.
    
 0.640
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.614
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.