STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAN1FANCD2 and FANCI associated nuclease 1. (1038 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.990
FANCD2
FA complementation group D2.
    
 0.982
PMS2
PMS1 homolog 2, mismatch repair system component.
   
 0.957
PMS1
PMS1 homolog 1, mismatch repair system component.
   
 0.946
FANCI
FA complementation group I.
    
 0.879
MLH3
mutL homolog 3.
   
 0.876
DCLRE1A
DNA cross-link repair 1A.
    
 0.829
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
    
 0.815
FAAP24
FA core complex associated protein 24.
     
 0.814
FANCL
FA complementation group L.
     
 0.799
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.