STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COA5Cytochrome c oxidase assembly factor 5. (75 aa)    
Predicted Functional Partners:
LOC101876045
Cytochrome c oxidase copper chaperone.
   
  
 0.751
CHCHD4
Coiled-coil-helix-coiled-coil-helix domain containing 4.
   
 
 0.655
ENSMUNP00000015758
annotation not available
   
  
 0.648
TIMM9
Translocase of inner mitochondrial membrane 9.
   
  
 0.640
LOC101869758
Mitochondrial ribosomal protein S18C.
   
  
 0.635
GFER
Growth factor, augmenter of liver regeneration.
   
  
 0.633
MRPL20
Mitochondrial ribosomal protein L20.
   
  
 0.611
TOMM7
Translocase of outer mitochondrial membrane 7.
   
  
 0.589
SCO1
Protein SCO1 homolog, mitochondrial.
   
  
 0.564
ENSMUNP00000000410
annotation not available
   
  
 0.554
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.