STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101877706semaphorin-3D-like. (766 aa)    
Predicted Functional Partners:
NRP1
Neuropilin 1.
    
 0.904
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.784
PLXND1
Plexin D1.
    
 0.598
ENSMUNP00000005243
annotation not available
    
 0.592
LOC101873659
Plexin A1.
    
0.592
PLXNA4
Plexin A4.
    
 0.592
PLXNA2
Plexin A2.
    
0.592
PLXNB1
plexin-B1.
    
 0.579
PLXNB2
Plexin B2.
    
0.579
LOC101875106
Transmembrane protein 2-like.
    
 0.578
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.