STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNOT8CCR4-NOT transcription complex subunit 8. (292 aa)    
Predicted Functional Partners:
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 0.987
CNOT9
CCR4-NOT transcription complex subunit 9.
   
 0.986
CNOT4
CCR4-NOT transcription complex subunit 4.
    
 0.985
DDX6
DEAD-box helicase 6.
   
 0.968
LOC101878361
CCR4-NOT transcription complex subunit 1.
   
 0.954
ENSMUNP00000000747
annotation not available
   
 0.954
PATL2
PAT1 homolog 2.
    
 
 0.952
CNOT6
CCR4-NOT transcription complex subunit 6.
    
 0.935
CNOT6L
CCR4-NOT transcription complex subunit 6 like.
    
 0.935
CNOT7
CCR4-NOT transcription complex subunit 7.
  
  
0.918
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.