Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NDUFA4NDUFA4 mitochondrial complex associated. (83 aa)    
Predicted Functional Partners:
NDUFA12
NADH:ubiquinone oxidoreductase subunit A12.
   
 0.999
NDUFA6
NADH:ubiquinone oxidoreductase subunit A6.
   
 0.998
NDUFB9
NADH:ubiquinone oxidoreductase subunit B9.
   
 0.996
COX7C
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.995
LOC101874877
Cytochrome c oxidase subunit 6C.
   
 0.994
NDUFA5
NADH:ubiquinone oxidoreductase subunit A5.
   
 0.988
LOC101881333
NADH:ubiquinone oxidoreductase subunit B8.
   
 0.987
ENSMUNP00000010158
annotation not available
   
 0.986
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.986
ENSMUNP00000000475
annotation not available
   
 0.985
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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