STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1GALT1Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1. (366 aa)    
Predicted Functional Partners:
NELFCD
Negative elongation factor complex member C/D.
    
 0.957
NELFB
Negative elongation factor B-like.
   
 0.951
GCNT4
Glucosaminyl (N-acetyl) transferase 4.
   
 0.930
ST6GALNAC1
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1.
    
 0.923
LOC101874181
C1GALT1 specific chaperone 1.
    
0.919
GALNT2
Polypeptide N-acetylgalactosaminyltransferase 2.
     
 0.916
POLR2H
RNA polymerase II subunit H.
    
  0.913
GALNT5
Polypeptide N-acetylgalactosaminyltransferase 5.
     
 0.899
POLR2B
RNA polymerase II subunit B.
    
  0.898
POLR2C
RNA polymerase II subunit C.
    
  0.891
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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