STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLX5Distal-less homeobox 5. (263 aa)    
Predicted Functional Partners:
DLX6
Distal-less homeobox 6.
   
 
 0.870
MSX2
Msh homeobox 2.
    
 0.638
HOXA11
Homeobox A11.
    
 
 0.630
SHOX
Short stature homeobox.
      
 0.615
BMP4
Bone morphogenetic protein 4.
     
 0.569
LEF1
Lymphoid enhancer binding factor 1.
    
 0.523
BMP2
Bone morphogenetic protein 2.
     
 0.509
RUNX1
RUNX family transcription factor 1.
   
 
 0.493
RUNX3
RUNX family transcription factor 3.
   
 
 0.493
RUNX2
RUNX family transcription factor 2.
   
 
 0.493
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.