RTCB protein (Melopsittacus undulatus) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

RTCB

RNA 2',3'-cyclic phosphate and 5'-OH ligase. (505 aa)

Predicted Functional Partners:

DDX1

0.977

ZBTB8OS

0.965

RTRAF

0.960

FAM98B

0.949

C2orf49

0.944

ENSMUNP00000000888

0.884

MCC

0.830

RCL1

0.830

ETF1

0.775

EIF3L

0.697

Your Current Organism:

Melopsittacus undulatus

NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C2orf49	DDX1	ENSMUNP00000016724	ENSMUNP00000018592	Chromosome unknown open reading frame, human C2orf49.	DEAD-box helicase 1.	0.922
C2orf49	FAM98B	ENSMUNP00000016724	ENSMUNP00000013712	Chromosome unknown open reading frame, human C2orf49.	Family with sequence similarity 98 member B.	0.941
C2orf49	RTCB	ENSMUNP00000016724	ENSMUNP00000001252	Chromosome unknown open reading frame, human C2orf49.	RNA 2',3'-cyclic phosphate and 5'-OH ligase.	0.944
C2orf49	RTRAF	ENSMUNP00000016724	ENSMUNP00000004942	Chromosome unknown open reading frame, human C2orf49.	RNA transcription, translation and transport factor.	0.929
C2orf49	ZBTB8OS	ENSMUNP00000016724	ENSMUNP00000021761	Chromosome unknown open reading frame, human C2orf49.	Zinc finger and BTB domain containing 8 opposite strand.	0.592
DDX1	C2orf49	ENSMUNP00000018592	ENSMUNP00000016724	DEAD-box helicase 1.	Chromosome unknown open reading frame, human C2orf49.	0.922
DDX1	FAM98B	ENSMUNP00000018592	ENSMUNP00000013712	DEAD-box helicase 1.	Family with sequence similarity 98 member B.	0.955
DDX1	RTCB	ENSMUNP00000018592	ENSMUNP00000001252	DEAD-box helicase 1.	RNA 2',3'-cyclic phosphate and 5'-OH ligase.	0.977
DDX1	RTRAF	ENSMUNP00000018592	ENSMUNP00000004942	DEAD-box helicase 1.	RNA transcription, translation and transport factor.	0.990
DDX1	ZBTB8OS	ENSMUNP00000018592	ENSMUNP00000021761	DEAD-box helicase 1.	Zinc finger and BTB domain containing 8 opposite strand.	0.777
EIF3L	RTCB	ENSMUNP00000000762	ENSMUNP00000001252	Eukaryotic translation initiation factor 3 subunit L.	RNA 2',3'-cyclic phosphate and 5'-OH ligase.	0.697
ENSMUNP00000000888	RTCB	ENSMUNP00000000888	ENSMUNP00000001252	annotation not available	RNA 2',3'-cyclic phosphate and 5'-OH ligase.	0.884
ENSMUNP00000000888	ZBTB8OS	ENSMUNP00000000888	ENSMUNP00000021761	annotation not available	Zinc finger and BTB domain containing 8 opposite strand.	0.404
ETF1	RTCB	ENSMUNP00000012051	ENSMUNP00000001252	Eukaryotic translation termination factor 1.	RNA 2',3'-cyclic phosphate and 5'-OH ligase.	0.775
ETF1	ZBTB8OS	ENSMUNP00000012051	ENSMUNP00000021761	Eukaryotic translation termination factor 1.	Zinc finger and BTB domain containing 8 opposite strand.	0.810
FAM98B	C2orf49	ENSMUNP00000013712	ENSMUNP00000016724	Family with sequence similarity 98 member B.	Chromosome unknown open reading frame, human C2orf49.	0.941
FAM98B	DDX1	ENSMUNP00000013712	ENSMUNP00000018592	Family with sequence similarity 98 member B.	DEAD-box helicase 1.	0.955
FAM98B	RTCB	ENSMUNP00000013712	ENSMUNP00000001252	Family with sequence similarity 98 member B.	RNA 2',3'-cyclic phosphate and 5'-OH ligase.	0.949
FAM98B	RTRAF	ENSMUNP00000013712	ENSMUNP00000004942	Family with sequence similarity 98 member B.	RNA transcription, translation and transport factor.	0.955
FAM98B	ZBTB8OS	ENSMUNP00000013712	ENSMUNP00000021761	Family with sequence similarity 98 member B.	Zinc finger and BTB domain containing 8 opposite strand.	0.700