STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM4PR/SET domain 4. (800 aa)    
Predicted Functional Partners:
ENSMUNP00000008330
annotation not available
    
 0.889
LOC101877939
Lysine methyltransferase 5A.
   
 0.887
ENSMUNP00000014674
annotation not available
    
 0.860
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.857
NGFR
Nerve growth factor receptor.
    
 0.854
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
   
 0.850
DOT1L
DOT1 like histone lysine methyltransferase.
     
 0.850
ENSMUNP00000000357
annotation not available
   
 0.848
KMT5B
Lysine methyltransferase 5B.
     
 0.848
LOC101869605
Histone-lysine N-methyltransferase SETMAR.
   
 0.834
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.