STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PWP1PWP1 homolog, endonuclein. (461 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2 homolog.
   
 
 0.974
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.963
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.960
GTPBP4
GTP binding protein 4.
   
 
 0.955
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.955
LOC101874848
Ribosomal L1 domain containing 1.
   
 
 0.954
WDR3
WD repeat domain 3.
   
  
 0.951
RBM34
RNA binding motif protein 34.
   
 
 0.951
SDAD1
SDA1 domain containing 1.
   
  
 0.949
GNL3
G protein nucleolar 3.
   
 
 0.936
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.