STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC85CCoiled-coil domain containing 85C. (392 aa)    
Predicted Functional Partners:
ARHGAP23
Rho GTPase activating protein 23.
    
 
 0.610
DTWD1
DTW domain containing 1.
      
 0.590
ARHGAP21
Rho GTPase activating protein 21.
    
 
 0.557
MPHOSPH10
M-phase phosphoprotein 10.
      
 0.531
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
      
 0.531
EBNA1BP2
EBNA1 binding protein 2.
      
 0.520
LOC101871014
Isthmin 2.
      
 0.487
CCNK
Cyclin K.
    
 
 0.451
CCDC85A
Coiled-coil domain containing 85A.
      
0.440
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
 
 0.432
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.