STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101875513Synaptophysin-like protein 1. (97 aa)    
Predicted Functional Partners:
VAMP1
Vesicle associated membrane protein 1.
   
 0.725
ENSMUNP00000018384
annotation not available
   
 0.725
NANS
N-acetylneuraminate synthase.
     
 0.667
M1AP
Meiosis 1 associated protein.
     
 0.657
GNE
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
     
 0.644
VAMP3
Vesicle associated membrane protein 3.
   
 0.602
SNAP25
Synaptosome associated protein 25.
   
 0.590
VAMP4
Vesicle associated membrane protein 4.
   
 0.571
LOC101870195
Hexosaminidase subunit alpha.
   
 
  0.528
HOGA1
4-hydroxy-2-oxoglutarate aldolase 1.
   
 
  0.501
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.