STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM87ATransmembrane protein 87A. (525 aa)    
Predicted Functional Partners:
KTN1
Kinectin 1.
    
  0.539
LOC101872893
cutA divalent cation tolerance homolog.
      
 0.524
TMEM177
Transmembrane protein 177.
      
 0.524
TMEM63C
Transmembrane protein 63C.
      
 0.520
LOC101874104
Ras homolog family member C.
    
 0.488
RHOB
Ras homolog family member B.
    
 0.488
RHOA
Ras homolog family member A.
    
 0.488
TMEM150C
Transmembrane protein 150C.
   
  
 0.479
ANAPC1
Anaphase promoting complex subunit 1.
      
 0.465
ENSMUNP00000000675
annotation not available
 
    
 0.455
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.