STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RETREG1Reticulophagy regulator 1. (362 aa)    
Predicted Functional Partners:
NMD3
NMD3 ribosome export adaptor.
   
 
 0.971
LSG1
Large 60S subunit nuclear export GTPase 1.
   
 
 0.959
LOC101876996
Eukaryotic translation initiation factor 6.
   
 
 0.956
LOC101873872
Proliferation-associated 2G4.
   
 
 0.954
GABARAPL1
GABA type A receptor associated protein like 1.
    
 
 0.930
RPL24
Ribosomal protein L24.
    
 
 0.886
RSL24D1
Ribosomal L24 domain containing 1.
   
 
 0.885
GNL2
G protein nucleolar 2.
   
 
 0.879
RPL23A
Ribosomal protein L23a.
   
 
 0.876
RPL29
Ribosomal protein L29.
    
 
 0.876
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.