STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX5Peroxisomal biogenesis factor 5. (605 aa)    
Predicted Functional Partners:
SCP2
Sterol carrier protein 2.
   
 0.999
PEX14
Peroxisomal biogenesis factor 14.
   
 0.996
HSDL2
Hydroxysteroid dehydrogenase like 2.
   
 0.993
NBR1
NBR1 autophagy cargo receptor.
    
 0.990
PEX7
Peroxisomal biogenesis factor 7.
    
 0.989
ECI2
enoyl-CoA delta isomerase 2.
   
 0.987
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
    
 0.983
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.982
EPHX2
Epoxide hydrolase 2.
   
 0.980
HACL1
2-hydroxyacyl-CoA lyase 1.
 
  
 0.978
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.