STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXL7F-box and leucine rich repeat protein 7. (491 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
   
 0.979
CUL1
Cullin 1.
    
 0.958
RBX1
Ring-box 1.
    
 0.937
CUL3
Cullin 3.
    
 0.833
ELOC
Elongin C.
    
 0.805
LOC101874167
Ribosomal protein S27a.
    
 0.776
COMMD4
COMM domain containing 4.
    
 0.740
AURKA
Aurora kinase A.
   
 0.733
CACUL1
CDK2 associated cullin domain 1.
    
 0.725
LOC101868790
Ubiquitin conjugating enzyme E2 F (putative).
    
  0.689
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.