STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1RComplement C1r. (712 aa)    
Predicted Functional Partners:
C1S
Complement C1s.
  
0.999
LOC101879758
Complement C4.
   
 0.958
C1QC
Complement C1q C chain.
   
 
 0.908
C1QA
Complement C1q A chain.
   
 0.906
C1QB
Complement C1q B chain.
   
 0.894
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.815
ENSMUNP00000008330
annotation not available
    
 0.789
ENSMUNP00000012437
annotation not available
    
 0.733
LOC101870373
Protein tyrosine kinase 7 (inactive).
    
 0.733
COLEC11
Collectin subfamily member 11.
    
 0.713
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.