STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFDNAfadin, adherens junction formation factor. (1789 aa)    
Predicted Functional Partners:
TJP1
Tight junction protein 1.
   
 0.970
LOC101878824
Tight junction protein 2.
   
 0.968
NECTIN3
Nectin cell adhesion molecule 3.
    
 0.958
RAP1B
RAP1B, member of RAS oncogene family.
    
 0.925
LOC101876984
RAP1A, member of RAS oncogene family.
    
 0.925
MRAS
Muscle RAS oncogene homolog.
    
 0.918
SORBS1
Sorbin and SH3 domain containing 1.
   
 0.918
LMO7
LIM domain 7.
    
 0.917
RRAS2
RAS related 2.
    
 0.912
CTNNA2
Catenin alpha 2.
    
 0.897
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.